Source code for mindquantum.algorithm.nisq.chem.uccsd

# Copyright 2021 Huawei Technologies Co., Ltd
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# ============================================================================
"""UCCSD ansatz."""

import itertools
from collections import OrderedDict

import numpy as np

from mindquantum.core.circuit import Circuit, decompose_single_term_time_evolution
from mindquantum.core.operators import FermionOperator, down_index, up_index
from mindquantum.third_party.interaction_operator import InteractionOperator
from mindquantum.utils.type_value_check import _require_package

from .transform import Transform


def _para_uccsd_singlet_generator(mol, threshold=0):  # pylint: disable=too-many-locals,too-many-statements
    """
    Generate a uccsd quantum circuit.

    Args:
        mol (molecular): A hdf5 molecular file generated by HiQ Fermion.
        threshold (float, optional): A threshold of parameters. If the absolute value of parameter is
            lower than the threshold, than we will not update it in VQE
            algorithm. Default: 0.
    """
    n_qubits = mol.n_qubits
    n_electrons = mol.n_electrons
    params = {}
    if n_qubits % 2 != 0:
        raise ValueError('The total number of spin-orbitals should be even.')
    out = []
    out_tmp = []
    n_spatial_orbitals = n_qubits // 2
    n_occupied = int(np.ceil(n_electrons / 2))
    n_virtual = n_spatial_orbitals - n_occupied

    # Unpack amplitudes
    n_single_amplitudes = n_occupied * n_virtual
    # Generate excitations
    spin_index_functions = [up_index, down_index]
    # Generate all spin-conserving single and double excitations derived
    # from one spatial occupied-virtual pair
    for i, (p, q) in enumerate(itertools.product(range(n_virtual), range(n_occupied))):  # pylint: disable=invalid-name

        # Get indices of spatial orbitals
        virtual_spatial = n_occupied + p
        occupied_spatial = q
        virtual_up = virtual_spatial * 2
        occupied_up = occupied_spatial * 2
        virtual_down = virtual_spatial * 2 + 1
        occupied_down = occupied_spatial * 2 + 1
        single_amps = mol.ccsd_single_amps[virtual_up, occupied_up]
        double1_amps = mol.ccsd_double_amps[virtual_up, occupied_up, virtual_down, occupied_down]
        single_amps_name = 'p' + str(i)
        double1_amps_name = 'p' + str(i + n_single_amplitudes)

        for spin in range(2):
            # Get the functions which map a spatial orbital index to a
            # spin orbital index
            this_index = spin_index_functions[spin]
            other_index = spin_index_functions[1 - spin]

            # Get indices of spin orbitals
            virtual_this = this_index(virtual_spatial)
            virtual_other = other_index(virtual_spatial)
            occupied_this = this_index(occupied_spatial)
            occupied_other = other_index(occupied_spatial)

            # Generate single excitations
            if abs(single_amps) > threshold:
                params[single_amps_name] = single_amps
                fermion_ops1 = FermionOperator(((occupied_this, 1), (virtual_this, 0)), 1)
                fermion_ops2 = FermionOperator(((virtual_this, 1), (occupied_this, 0)), 1)
                out.append([fermion_ops1 - fermion_ops2, single_amps_name])

            # Generate double excitation
            if abs(double1_amps) > threshold:
                params[double1_amps_name] = double1_amps
                fermion_ops1 = FermionOperator(
                    ((virtual_this, 1), (occupied_this, 0), (virtual_other, 1), (occupied_other, 0)), 1
                )
                fermion_ops2 = FermionOperator(
                    ((occupied_other, 1), (virtual_other, 0), (occupied_this, 1), (virtual_this, 0)), 1
                )
                out.append([fermion_ops1 - fermion_ops2, double1_amps_name])
    out.extend(out_tmp)
    out_tmp = []
    # Generate all spin-conserving double excitations derived
    # from two spatial occupied-virtual pairs
    for i, ((p, q), (r, s)) in enumerate(  # pylint: disable=invalid-name
        itertools.combinations(itertools.product(range(n_virtual), range(n_occupied)), 2)
    ):

        # Get indices of spatial orbitals
        virtual_spatial_1 = n_occupied + p
        occupied_spatial_1 = q
        virtual_spatial_2 = n_occupied + r
        occupied_spatial_2 = s

        virtual_1_up = virtual_spatial_1 * 2
        occupied_1_up = occupied_spatial_1 * 2
        virtual_2_up = virtual_spatial_2 * 2 + 1
        occupied_2_up = occupied_spatial_2 * 2 + 1

        double2_amps = mol.ccsd_double_amps[virtual_1_up, occupied_1_up, virtual_2_up, occupied_2_up]
        double2_amps_name = 'p' + str(i + 2 * n_single_amplitudes)

        # Generate double excitations
        for (spin_a, spin_b) in itertools.product(range(2), repeat=2):
            # Get the functions which map a spatial orbital index to a
            # spin orbital index
            index_a = spin_index_functions[spin_a]
            index_b = spin_index_functions[spin_b]

            # Get indices of spin orbitals
            virtual_1_a = index_a(virtual_spatial_1)
            occupied_1_a = index_a(occupied_spatial_1)
            virtual_2_b = index_b(virtual_spatial_2)
            occupied_2_b = index_b(occupied_spatial_2)
            if abs(double2_amps) > threshold:
                params[double2_amps_name] = double2_amps
                fermion_ops1 = FermionOperator(
                    ((virtual_1_a, 1), (occupied_1_a, 0), (virtual_2_b, 1), (occupied_2_b, 0)), 1
                )
                fermion_ops2 = FermionOperator(
                    ((occupied_2_b, 1), (virtual_2_b, 0), (occupied_1_a, 1), (virtual_1_a, 0)), 1
                )
                out.append([fermion_ops1 - fermion_ops2, double2_amps_name])
    return out, params


def _transform2pauli(fermion_ansatz):
    """Transform a fermion ansatz to pauli ansatz based on jordan-wigner transformation."""
    out = OrderedDict()
    for i in fermion_ansatz:
        qubit_generator = Transform(i[0]).jordan_wigner()
        if qubit_generator.terms != {}:
            for key, term in qubit_generator.terms.items():
                if key not in out:
                    out[key] = OrderedDict({i[1]: float(term.imag)})
                else:
                    if i[1] in out[key]:
                        out[key][i[1]] += float(term.imag)
                    else:
                        out[key][i[1]] = float(term.imag)
    return out


def _pauli2circuit(pauli_ansatz):
    """Transform a pauli ansatz to parameterized quantum circuit."""
    circuit = Circuit()
    for k, v in pauli_ansatz.items():
        circuit += decompose_single_term_time_evolution(k, v)
    return circuit


[docs]def generate_uccsd(molecular, threshold=0): """ Generate a uccsd quantum circuit based on a molecular data generated by Openfermion. Args: molecular (Union[str, MolecularData]): the name of the molecular data file, or openfermion MolecularData. threshold (float): the threshold to filter out the uccsd amplitude. We only keep the excitation operator with absolute value of amplitude greater than `threshold`, so that if `threshold=0`, we only keep excitation operator with non zero amplitude. Default: 0. Returns: - **uccsd_circuit** (Circuit), the ansatz circuit generated by uccsd method. - **initial_amplitudes** (numpy.ndarray), the initial parameter values of uccsd circuit. - **parameters_name** (list[str]), the name of initial parameters. - **qubit_hamiltonian** (QubitOperator), the hamiltonian of the molecule. - **n_qubits** (int), the number of qubits in simulation. - **n_electrons** (int), the number of electrons of the molecule. """ try: # pylint: disable=import-outside-toplevel from openfermion.chem import MolecularData except (ImportError, AttributeError): _require_package("openfermion", "1.5.0") if isinstance(molecular, str): mol = MolecularData(filename=molecular) mol.load() else: mol = molecular print(f"ccsd:{mol.ccsd_energy}.") print(f"fci:{mol.fci_energy}.") fermion_ansatz, parameters = _para_uccsd_singlet_generator(mol, threshold) pauli_ansatz = _transform2pauli(fermion_ansatz) uccsd_circuit = _pauli2circuit(pauli_ansatz) ham_of = mol.get_molecular_hamiltonian() inter_ops = InteractionOperator(*ham_of.n_body_tensors.values()) ham_hiq = FermionOperator(inter_ops) qubit_hamiltonian = Transform(ham_hiq).jordan_wigner() qubit_hamiltonian.compress() parameters_name = list(parameters.keys()) initial_amplitudes = [parameters[i] for i in parameters_name] return uccsd_circuit, initial_amplitudes, parameters_name, qubit_hamiltonian, mol.n_qubits, mol.n_electrons